Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | PHEP_RS02705 | Not Available | Positive | 645360 - 646370 | 35909.5 |
| tatd family hydrolase | PHEP_RS02710 | Not Available | Positive | 646481 - 647248 | 28985.7 |
| asparaginase | PHEP_RS02715 | Not Available | Positive | 647251 - 648270 | 37754.6 |
| mbl fold metallo-hydrolase | PHEP_RS02720 | Not Available | Positive | 648366 - 649781 | 51719.2 |
| alpha/beta hydrolase | PHEP_RS02725 | Not Available | Negative | 649778 - 650770 | 36858.5 |
| polyprenyl synthetase family protein | PHEP_RS02730 | Not Available | Positive | 650844 - 651815 | 36393.2 |
| upxy family transcription antiterminator | PHEP_RS02735 | Not Available | Positive | 652520 - 653026 | 19583.1 |
| glycosyltransferase | PHEP_RS02740 | Not Available | Positive | 653468 - 654703 | 47706.1 |
| hypothetical protein | PHEP_RS02745 | Not Available | Positive | 654687 - 655265 | 22803.7 |
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS02750 | Not Available | Positive | 655258 - 656385 | 41897.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
