Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | PHEP_RS02605 | Not Available | Positive | 629930 - 630946 | 37692.7 |
| iron-containing alcohol dehydrogenase | PHEP_RS02610 | Not Available | Positive | 630969 - 632120 | 40675.4 |
| dihydrodipicolinate synthase family protein | PHEP_RS02615 | Not Available | Positive | 632121 - 633059 | 34118.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PHEP_RS02620 | Not Available | Positive | 633046 - 634080 | 36911.8 |
| four-carbon acid sugar kinase family protein | PHEP_RS02625 | Not Available | Positive | 634092 - 635258 | 42857.9 |
| sodium:solute symporter | PHEP_RS02630 | Not Available | Positive | 635288 - 636856 | 57126.4 |
| bacillithiol system redox-active protein ytxj | PHEP_RS02635 | Not Available | Negative | 636857 - 637192 | 12735.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | PHEP_RS02640 | Not Available | Negative | 637404 - 637895 | 17241.7 |
| redoxin domain-containing protein | PHEP_RS02645 | Not Available | Positive | 638014 - 638475 | 17239.7 |
| dsba family protein | PHEP_RS02650 | Not Available | Positive | 638477 - 638998 | 18955.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
