Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | PHEP_RS02555 | Not Available | Positive | 618378 - 619322 | 33672.0 |
| anti-sigma factor domain-containing protein | PHEP_RS02560 | Not Available | Negative | 619319 - 620203 | 32266.3 |
| rna polymerase sigma factor | PHEP_RS02565 | Not Available | Negative | 620205 - 620756 | 20785.1 |
| lipoyl synthase | PHEP_RS02570 | Not Available | Negative | 620807 - 621685 | 32936.7 |
| meta domain-containing protein | PHEP_RS02575 | Not Available | Negative | 621756 - 622175 | 15638.2 |
| osmc family protein | PHEP_RS02580 | Not Available | Positive | 622267 - 622671 | 14715.5 |
| hypothetical protein | PHEP_RS02585 | Not Available | Positive | 622843 - 623028 | 7157.47 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS02590 | Not Available | Positive | 623244 - 626483 | 118613.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS02595 | Not Available | Positive | 626520 - 627938 | 52965.2 |
| exo-alpha-sialidase | PHEP_RS02600 | Not Available | Positive | 627952 - 629796 | 69054.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
