Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS02455 | Not Available | Negative | 586078 - 586671 | 22853.4 |
| hypothetical protein | PHEP_RS02460 | Not Available | Positive | 586777 - 587283 | 18700.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | PHEP_RS02465 | Not Available | Positive | 587283 - 587861 | 21924.1 |
| osta-like protein | PHEP_RS02470 | Not Available | Negative | 587836 - 590139 | 86222.5 |
| trna lysidine(34) synthetase tils | PHEP_RS02475 | Not Available | Positive | 590205 - 591602 | 52619.1 |
| hypothetical protein | PHEP_RS02480 | Not Available | Positive | 591632 - 592114 | 18907.0 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | PHEP_RS02485 | Not Available | Positive | 592227 - 593372 | 42722.2 |
| lactonase family protein | PHEP_RS02490 | Not Available | Negative | 593382 - 594500 | 40714.3 |
| pseudouridine synthase | PHEP_RS02495 | Not Available | Negative | 594507 - 595925 | 53552.9 |
| lytic transglycosylase domain-containing protein | PHEP_RS02500 | Not Available | Positive | 596493 - 597287 | 29994.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
