Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | PHEP_RS00205 | Not Available | Positive | 42079 - 43305 | 45327.5 |
| mechanosensitive ion channel family protein | PHEP_RS00210 | Not Available | Positive | 43308 - 44435 | 42669.9 |
| phosphatidylserine decarboxylase family protein | PHEP_RS00215 | Not Available | Negative | 44489 - 45148 | 24917.5 |
| hypoxanthine phosphoribosyltransferase | PHEP_RS00220 | Not Available | Negative | 45191 - 45730 | 20037.2 |
| transglycosylase domain-containing protein | PHEP_RS00225 | Not Available | Negative | 45744 - 47903 | 81469.5 |
| mrp/nbp35 family atp-binding protein | PHEP_RS00230 | Not Available | Positive | 48023 - 49126 | 39168.6 |
| nifu family protein | PHEP_RS00235 | Not Available | Positive | 49168 - 49413 | 8763.79 |
| hypothetical protein | PHEP_RS00240 | Not Available | Positive | 49469 - 50110 | 24028.9 |
| peptide deformylase | PHEP_RS00245 | Not Available | Negative | 50107 - 50667 | 21398.0 |
| m16 family metallopeptidase | PHEP_RS00250 | Not Available | Negative | 50686 - 51915 | 45909.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
