Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | PHEP_RS02405 | Not Available | Negative | 573913 - 575547 | 60468.2 |
| dna mismatch repair endonuclease mutl | PHEP_RS02410 | Not Available | Positive | 575701 - 577572 | 69544.1 |
| rhomboid family intramembrane serine protease | PHEP_RS02415 | Not Available | Positive | 577579 - 578304 | 27339.9 |
| rhomboid family intramembrane serine protease | PHEP_RS02420 | Not Available | Positive | 578297 - 579157 | 32093.6 |
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS02425 | Not Available | Positive | 579157 - 580269 | 42687.1 |
| cysteine--trna ligase | PHEP_RS02430 | Not Available | Positive | 580288 - 581748 | 55042.8 |
| yybh family protein | PHEP_RS02435 | Not Available | Positive | 581825 - 582685 | 31840.7 |
| glycerophosphodiester phosphodiesterase family protein | PHEP_RS02440 | Not Available | Positive | 582787 - 583668 | 33625.3 |
| aaa family atpase | PHEP_RS02445 | Not Available | Negative | 583677 - 584639 | 35408.7 |
| peptidylprolyl isomerase | PHEP_RS02450 | Not Available | Negative | 584646 - 586013 | 52125.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
