Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88/105 protein | PHEP_RS02255 | Not Available | Negative | 536361 - 537506 | 43361.1 |
| atp-binding protein | PHEP_RS02260 | Not Available | Positive | 537788 - 538609 | 30043.3 |
| phosphocholine-specific phospholipase c | PHEP_RS02265 | Not Available | Positive | 538758 - 541292 | 94148.3 |
| osmc family protein | PHEP_RS02270 | Not Available | Positive | 541353 - 541829 | 17592.0 |
| mfs transporter | PHEP_RS02275 | Not Available | Positive | 541973 - 543235 | 46074.8 |
| fad-dependent oxidoreductase | PHEP_RS02280 | Not Available | Positive | 543255 - 544649 | 50468.5 |
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS02285 | Not Available | Positive | 544652 - 545563 | 34000.7 |
| Trna-val | Not Available | Not Available | Positive | 545627 - 545704 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 545750 - 545827 | Not Available |
| dna repair protein reco | PHEP_RS02300 | Not Available | Negative | 545953 - 546678 | 27849.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
