Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane 220 family protein | PHEP_RS02155 | Not Available | Negative | 504146 - 504514 | 14028.4 |
| dead/deah box helicase | PHEP_RS02160 | Not Available | Positive | 504634 - 508020 | 129210.0 |
| beta-n-acetylhexosaminidase | PHEP_RS02165 | Not Available | Positive | 508123 - 509979 | 69404.6 |
| atp-dependent dna helicase | PHEP_RS02170 | Not Available | Negative | 509980 - 511899 | 71552.2 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | PHEP_RS02175 | Not Available | Negative | 511999 - 513558 | 58414.1 |
| hypothetical protein | PHEP_RS02180 | Not Available | Negative | 513617 - 515374 | 63715.7 |
| m16 family metallopeptidase | PHEP_RS02185 | Not Available | Negative | 515380 - 518199 | 105831.0 |
| hypothetical protein | PHEP_RS02190 | Not Available | Negative | 518211 - 518678 | 17751.7 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS02195 | Not Available | Negative | 518689 - 520149 | 53580.0 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS02200 | Not Available | Negative | 520152 - 523340 | 118248.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
