Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ta family plp-dependent enzyme | PHEP_RS02105 | Not Available | Positive | 495235 - 496362 | 42133.0 |
| hypothetical protein | PHEP_RS02110 | Not Available | Negative | 496355 - 496897 | 20479.8 |
| rna polymerase sigma factor | PHEP_RS02115 | Not Available | Negative | 496901 - 497377 | 18486.4 |
| hypothetical protein | PHEP_RS02120 | Not Available | Positive | 497530 - 497796 | 9755.21 |
| alkaline phosphatase family protein | PHEP_RS02125 | Not Available | Negative | 497810 - 499162 | 50924.1 |
| metabolite traffic protein eboe | PHEP_RS02130 | Not Available | Negative | 499164 - 500363 | 45050.1 |
| 3-dehydroquinate synthase | PHEP_RS02135 | Not Available | Negative | 500353 - 501537 | 43436.8 |
| ubia-like protein eboc | PHEP_RS02140 | Not Available | Negative | 501556 - 502434 | 31392.1 |
| tatd family hydrolase | PHEP_RS02145 | Not Available | Negative | 502436 - 503422 | 37157.1 |
| eboa domain-containing protein | PHEP_RS02150 | Not Available | Negative | 503425 - 504135 | 27266.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
