Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | PHEP_RS21210 | Not Available | Positive | 5131713 - 5132216 | 19113.8 |
| crp/fnr family transcriptional regulator | PHEP_RS21215 | Not Available | Negative | 5132248 - 5132817 | 21703.5 |
| dmt family transporter | PHEP_RS21220 | Not Available | Positive | 5132924 - 5133247 | 11744.7 |
| duf2911 domain-containing protein | PHEP_RS21225 | Not Available | Negative | 5133264 - 5133818 | 20689.1 |
| hypothetical protein | PHEP_RS21230 | Not Available | Negative | 5133851 - 5134033 | 6626.12 |
| glycoside hydrolase family 9 protein | PHEP_RS21235 | Not Available | Negative | 5134074 - 5135879 | 67734.6 |
| tetr/acrr family transcriptional regulator | PHEP_RS21240 | Not Available | Positive | 5136046 - 5136672 | 23514.8 |
| tolc family protein | PHEP_RS21245 | Not Available | Positive | 5136662 - 5137978 | 48633.4 |
| hlyd family secretion protein | PHEP_RS21250 | Not Available | Positive | 5137999 - 5139042 | 37410.5 |
| dha2 family efflux mfs transporter permease subunit | PHEP_RS21255 | Not Available | Positive | 5139046 - 5140593 | 56194.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
