Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl-peptidase 3 family protein | PHEP_RS21160 | Not Available | Positive | 5119105 - 5120784 | 62374.3 |
| response regulator | PHEP_RS21165 | Not Available | Negative | 5120786 - 5121148 | 13454.0 |
| chemotaxis protein cheb | PHEP_RS21170 | Not Available | Negative | 5121169 - 5121750 | 21147.7 |
| cher family methyltransferase | PHEP_RS21175 | Not Available | Negative | 5121732 - 5122556 | 31909.3 |
| response regulator | PHEP_RS21180 | Not Available | Negative | 5122565 - 5122933 | 13413.6 |
| response regulator | PHEP_RS21185 | Not Available | Negative | 5122958 - 5126548 | 133527.0 |
| hybrid sensor histidine kinase/response regulator | PHEP_RS21190 | Not Available | Negative | 5126560 - 5127684 | 41833.8 |
| neutral zinc metallopeptidase | PHEP_RS21195 | Not Available | Negative | 5127790 - 5128629 | 30485.8 |
| glutamate--trna ligase | PHEP_RS21200 | Not Available | Negative | 5128699 - 5130207 | 56639.8 |
| sensor histidine kinase | PHEP_RS21205 | Not Available | Positive | 5130518 - 5131735 | 46715.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
