Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_04164 | PHEP_RS21060 | Not Available | Negative | 5100945 - 5101280 | Not Available |
| lyse family translocator | PHEP_RS21065 | Not Available | Positive | 5101381 - 5102016 | 23300.4 |
| class i sam-dependent rrna methyltransferase | PHEP_RS21070 | Not Available | Positive | 5102153 - 5103337 | 43918.7 |
| duf6814 family protein | PHEP_RS21075 | Not Available | Negative | 5103340 - 5103588 | 9128.42 |
| mfs transporter | PHEP_RS21080 | Not Available | Negative | 5103600 - 5105144 | 56195.0 |
| nucleoid-associated protein | PHEP_RS21085 | Not Available | Negative | 5105276 - 5106331 | 40818.0 |
| terc family protein | PHEP_RS21090 | Not Available | Negative | 5106335 - 5107129 | 29315.8 |
| hypothetical protein | PHEP_RS21095 | Not Available | Negative | 5107215 - 5108375 | 41454.2 |
| hypothetical protein | PHEP_RS21100 | Not Available | Negative | 5108402 - 5108929 | 20392.7 |
| rna polymerase sigma factor | PHEP_RS21105 | Not Available | Negative | 5108931 - 5109473 | 21068.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
