Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | PHEP_RS21010 | Not Available | Positive | 5091853 - 5092530 | 24837.8 |
| dna polymerase i | PHEP_RS21015 | Not Available | Negative | 5092527 - 5095346 | 105559.0 |
| hypothetical protein | PHEP_RS21020 | Not Available | Positive | 5095411 - 5096106 | 25200.5 |
| dna-3-methyladenine glycosylase i | PHEP_RS21025 | Not Available | Negative | 5096108 - 5096668 | 21303.7 |
| mgmt family protein | PHEP_RS21030 | Not Available | Negative | 5096679 - 5097005 | 12013.6 |
| trna (guanosine(46)-n7)-methyltransferase trmb | PHEP_RS21035 | Not Available | Negative | 5097005 - 5097655 | 25281.3 |
| gdp-l-fucose synthase | PHEP_RS21040 | Not Available | Positive | 5097776 - 5098705 | 34894.0 |
| hydrogen peroxide-inducible genes activator | PHEP_RS21045 | Not Available | Positive | 5098744 - 5099676 | 35429.6 |
| superoxide dismutase | PHEP_RS21050 | Not Available | Negative | 5099749 - 5100354 | 22216.1 |
| nucleoside deaminase | PHEP_RS21055 | Not Available | Negative | 5100472 - 5100945 | 17216.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
