Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallo-hydrolase | PHEP_RS20960 | Not Available | Negative | 5082065 - 5083147 | 39794.4 |
| pyrroline-5-carboxylate reductase | PHEP_RS20965 | Not Available | Negative | 5083164 - 5083982 | 28249.2 |
| acetylglutamate kinase | PHEP_RS20970 | Not Available | Negative | 5083985 - 5084776 | 28025.9 |
| acetylornithine carbamoyltransferase | PHEP_RS20975 | Not Available | Negative | 5084781 - 5085743 | 35924.2 |
| aspartate aminotransferase family protein | PHEP_RS20980 | Not Available | Negative | 5085740 - 5086873 | 40668.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | PHEP_RS20985 | Not Available | Negative | 5086952 - 5087923 | 35385.4 |
| argininosuccinate synthase | PHEP_RS20990 | Not Available | Negative | 5087913 - 5089106 | 44343.8 |
| n-acetyltransferase | PHEP_RS20995 | Not Available | Negative | 5089120 - 5089821 | 26553.4 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS21000 | Not Available | Negative | 5090162 - 5091367 | 45308.8 |
| ybab/ebfc family nucleoid-associated protein | PHEP_RS21005 | Not Available | Positive | 5091518 - 5091823 | 10883.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
