Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase ii | PHEP_RS20910 | Not Available | Positive | 5071868 - 5073121 | 44824.3 |
| ribonuclease iii | PHEP_RS20915 | Not Available | Positive | 5073131 - 5073859 | 27697.7 |
| hypothetical protein | PHEP_RS20920 | Not Available | Negative | 5073856 - 5074569 | 27500.0 |
| yicc/yloc family endoribonuclease | PHEP_RS20925 | Not Available | Positive | 5074680 - 5075543 | 32750.3 |
| guanylate kinase | PHEP_RS20930 | Not Available | Positive | 5075550 - 5076119 | 21802.1 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | PHEP_RS20935 | Not Available | Positive | 5076129 - 5076701 | 21721.1 |
| sam-dependent methyltransferase | PHEP_RS20940 | Not Available | Negative | 5076698 - 5077411 | 26352.1 |
| duf6600 domain-containing protein | PHEP_RS20945 | Not Available | Positive | 5077730 - 5079046 | 50442.1 |
| peptide chain release factor 3 | PHEP_RS20950 | Not Available | Positive | 5079129 - 5080709 | 59917.8 |
| argininosuccinate lyase | PHEP_RS20955 | Not Available | Negative | 5080712 - 5082043 | 49574.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
