Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | PHEP_RS02055 | Not Available | Negative | 484259 - 485878 | 60069.2 |
| ph domain-containing protein | PHEP_RS02060 | Not Available | Negative | 485889 - 486530 | 24287.1 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | PHEP_RS02065 | Not Available | Negative | 486579 - 487298 | 26801.4 |
| serine--trna ligase | PHEP_RS02070 | Not Available | Positive | 487341 - 488612 | 47392.7 |
| hypothetical protein | PHEP_RS02075 | Not Available | Negative | 488698 - 489012 | 11727.7 |
| simpl domain-containing protein | PHEP_RS02080 | Not Available | Negative | 489163 - 489870 | 25997.5 |
| lipoprotein signal peptidase | PHEP_RS02085 | Not Available | Negative | 489954 - 490556 | 22681.1 |
| trar/dksa family transcriptional regulator | PHEP_RS02090 | Not Available | Negative | 490556 - 490936 | 14426.2 |
| isoleucine--trna ligase | PHEP_RS02095 | Not Available | Negative | 490942 - 494331 | 128439.0 |
| nadph-dependent fmn reductase | PHEP_RS02100 | Not Available | Negative | 494422 - 494955 | 19162.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
