Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | PHEP_RS20865 | Not Available | Positive | 5064204 - 5064812 | 21856.3 |
| porin family protein | PHEP_RS20870 | Not Available | Positive | 5065060 - 5065704 | 23158.7 |
| hypothetical protein | PHEP_RS22275 | Not Available | Positive | 5065842 - 5066018 | 6647.47 |
| glycerol kinase glpk | PHEP_RS20875 | Not Available | Positive | 5066163 - 5067653 | 53742.1 |
| mip/aquaporin family protein | PHEP_RS20880 | Not Available | Positive | 5067687 - 5068418 | 25382.6 |
| lytr/algr family response regulator transcription factor | PHEP_RS20885 | Not Available | Negative | 5068478 - 5069173 | 26135.2 |
| Trna-ser | Not Available | Not Available | Positive | 5069317 - 5069404 | Not Available |
| pyruvate kinase | PHEP_RS20895 | Not Available | Negative | 5069453 - 5070883 | 52629.8 |
| ipexxxvdy family protein | PHEP_RS20900 | Not Available | Negative | 5071026 - 5071445 | 16288.7 |
| acyl carrier protein | PHEP_RS20905 | Not Available | Positive | 5071603 - 5071839 | 8487.95 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
