Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | PHEP_RS20815 | Not Available | Positive | 5045575 - 5048301 | 100376.0 |
| amidohydrolase family protein | PHEP_RS20820 | Not Available | Positive | 5048294 - 5049604 | 47401.1 |
| lrp/asnc ligand binding domain-containing protein | PHEP_RS20825 | Not Available | Positive | 5050146 - 5050619 | 17932.9 |
| tex family protein | PHEP_RS20830 | Not Available | Negative | 5050887 - 5053214 | 85473.9 |
| pyruvate dehydrogenase complex e1 component subunit beta | PHEP_RS20835 | Not Available | Negative | 5053364 - 5054350 | 36017.6 |
| pd-(d/e)xk nuclease family protein | PHEP_RS20840 | Not Available | Negative | 5054508 - 5057363 | 108395.0 |
| uvrd-helicase domain-containing protein | PHEP_RS20845 | Not Available | Negative | 5057365 - 5060586 | 122174.0 |
| thif family adenylyltransferase | PHEP_RS20850 | Not Available | Negative | 5060637 - 5061416 | 28528.1 |
| tatd family hydrolase | PHEP_RS20855 | Not Available | Negative | 5061418 - 5062074 | 24411.0 |
| glycoside hydrolase family 3 protein | PHEP_RS20860 | Not Available | Negative | 5062084 - 5063790 | 62692.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
