Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol/lipid kinase family protein | PHEP_RS20765 | Not Available | Positive | 5037970 - 5038848 | 32360.6 |
| tonb family protein | PHEP_RS20770 | Not Available | Negative | 5038857 - 5039507 | 24198.1 |
| 30s ribosome-binding factor rbfa | PHEP_RS20775 | Not Available | Negative | 5039549 - 5039932 | 14386.0 |
| gtpase hflx | PHEP_RS20780 | Not Available | Negative | 5039964 - 5041154 | 45533.0 |
| indole-3-glycerol phosphate synthase trpc | PHEP_RS20785 | Not Available | Negative | 5041177 - 5041968 | 28978.0 |
| anthranilate synthase component ii | PHEP_RS20790 | Not Available | Negative | 5041971 - 5042558 | 21719.9 |
| anthranilate synthase component i family protein | PHEP_RS20795 | Not Available | Negative | 5042563 - 5043966 | 53199.9 |
| hypothetical protein | PHEP_RS20800 | Not Available | Negative | 5044210 - 5044653 | 16474.8 |
| hypothetical protein | PHEP_RS20805 | Not Available | Negative | 5044766 - 5045005 | 9310.0 |
| iron chaperone | PHEP_RS20810 | Not Available | Positive | 5045134 - 5045520 | 14618.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
