Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | PHEP_RS20715 | Not Available | Negative | 5026608 - 5027843 | 45928.6 |
| mbl fold metallo-hydrolase | PHEP_RS20720 | Not Available | Negative | 5027866 - 5028504 | 24015.7 |
| gliding motility lipoprotein gldd | PHEP_RS20725 | Not Available | Negative | 5028508 - 5029086 | 22840.0 |
| shikimate dehydrogenase family protein | PHEP_RS20730 | Not Available | Negative | 5029088 - 5029831 | 27909.6 |
| phosphosulfolactate synthase | PHEP_RS20735 | Not Available | Negative | 5029860 - 5030627 | 28792.6 |
| tetratricopeptide repeat protein | PHEP_RS20740 | Not Available | Negative | 5030693 - 5032096 | 55151.4 |
| gin domain-containing protein | PHEP_RS20745 | Not Available | Negative | 5032443 - 5033084 | 23548.6 |
| dead/deah box helicase | PHEP_RS20750 | Not Available | Positive | 5033363 - 5036257 | 111986.0 |
| leucyl/phenylalanyl-trna--protein transferase | PHEP_RS20755 | Not Available | Negative | 5036250 - 5036885 | 23956.9 |
| app1 family protein | PHEP_RS20760 | Not Available | Negative | 5036944 - 5037915 | 37473.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
