Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | PHEP_RS20665 | Not Available | Positive | 5013315 - 5016179 | 106003.0 |
| glycoside hydrolase family 10 protein | PHEP_RS20670 | Not Available | Negative | 5016240 - 5017799 | 58920.0 |
| hypothetical protein | PHEP_RS20675 | Not Available | Positive | 5017980 - 5018888 | 34388.0 |
| sensor histidine kinase | PHEP_RS20680 | Not Available | Negative | 5018880 - 5022605 | 142659.0 |
| acp s-malonyltransferase | PHEP_RS20685 | Not Available | Negative | 5022648 - 5023526 | 31194.7 |
| gtp cyclohydrolase i fole | PHEP_RS20690 | Not Available | Negative | 5023581 - 5024213 | 23863.8 |
| 6-pyruvoyl trahydropterin synthase family protein | PHEP_RS20695 | Not Available | Negative | 5024223 - 5024636 | 15764.6 |
| futalosine hydrolase | PHEP_RS20700 | Not Available | Positive | 5024709 - 5025341 | 22844.7 |
| menaquinone biosynthesis family protein | PHEP_RS20705 | Not Available | Positive | 5025376 - 5026221 | 31809.6 |
| hypothetical protein | PHEP_RS20710 | Not Available | Negative | 5026226 - 5026603 | 14095.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
