Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | PHEP_RS20615 | Not Available | Negative | 4997792 - 4999003 | 46166.1 |
| hypothetical protein | PHEP_RS22110 | Not Available | Negative | 4999003 - 4999359 | 13127.5 |
| cdc27 family protein | PHEP_RS20625 | Not Available | Negative | 4999467 - 5000786 | 50143.4 |
| luxr c-terminal-related transcriptional regulator | PHEP_RS20630 | Not Available | Positive | 5001604 - 5002362 | 28982.8 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS20635 | Not Available | Negative | 5002470 - 5004308 | 69085.4 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS20640 | Not Available | Negative | 5004320 - 5007739 | 124450.0 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS20645 | Not Available | Positive | 5007986 - 5008732 | 27779.7 |
| anhydro-n-acetylmuramic acid kinase | PHEP_RS20650 | Not Available | Negative | 5008770 - 5009969 | 43506.4 |
| glucosamine-6-phosphate deaminase | PHEP_RS20655 | Not Available | Positive | 5010143 - 5012062 | 72447.4 |
| acyltransferase family protein | PHEP_RS20660 | Not Available | Positive | 5012131 - 5013285 | 42615.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
