Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4623 domain-containing protein | PHEP_RS20565 | Not Available | Negative | 4981660 - 4983090 | 51209.9 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS20570 | Not Available | Negative | 4983130 - 4984938 | 67905.5 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS20575 | Not Available | Negative | 4984956 - 4988360 | 125018.0 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS20580 | Not Available | Positive | 4988639 - 4989385 | 27736.7 |
| phosphodiester glycosidase family protein | PHEP_RS20585 | Not Available | Negative | 4989467 - 4990453 | 35577.1 |
| duf4397 domain-containing protein | PHEP_RS20590 | Not Available | Negative | 4990500 - 4991297 | 29595.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS20595 | Not Available | Negative | 4991309 - 4992928 | 60533.1 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS20600 | Not Available | Negative | 4992941 - 4996024 | 112723.0 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS20605 | Not Available | Positive | 4996365 - 4997111 | 27499.4 |
| hypothetical protein | PHEP_RS20610 | Not Available | Negative | 4997167 - 4997799 | 24922.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
