Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar mfs transporter | PHEP_RS20515 | Not Available | Positive | 4971042 - 4972331 | 46810.0 |
| duf4091 domain-containing protein | PHEP_RS20520 | Not Available | Negative | 4972339 - 4974129 | 67997.7 |
| Trna-asp | Not Available | Not Available | Positive | 4974380 - 4974456 | Not Available |
| peptide chain release factor 1 | PHEP_RS20530 | Not Available | Negative | 4974554 - 4975627 | 40185.9 |
| udp-2,3-diacylglucosamine diphosphatase | PHEP_RS20535 | Not Available | Negative | 4975791 - 4976537 | 29225.9 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS20540 | Not Available | Positive | 4976668 - 4977678 | 36671.3 |
| 2fe-2s iron-sulfur cluster-binding protein | PHEP_RS20545 | Not Available | Positive | 4977682 - 4978011 | 11931.3 |
| s41 family peptidase | PHEP_RS20550 | Not Available | Negative | 4978018 - 4979718 | 63030.6 |
| hypothetical protein | PHEP_RS20555 | Not Available | Negative | 4979796 - 4980011 | 8191.9 |
| glycoside hydrolase family 10 protein | PHEP_RS20560 | Not Available | Negative | 4980145 - 4981590 | 54075.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
