Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | PHEP_RS02005 | Not Available | Positive | 474127 - 475263 | 42729.4 |
| abc transporter permease | PHEP_RS02010 | Not Available | Positive | 475263 - 476354 | 40023.7 |
| ribonuclease hii | PHEP_RS02015 | Not Available | Positive | 476384 - 476995 | 22980.6 |
| glycosyltransferase family 4 protein | PHEP_RS02020 | Not Available | Positive | 477013 - 478215 | 46720.1 |
| glycine cleavage system aminomethyltransferase gcvt | PHEP_RS02025 | Not Available | Positive | 478257 - 479336 | 39588.4 |
| 2-phosphosulfolactate phosphatase | PHEP_RS02030 | Not Available | Positive | 479373 - 480092 | 26292.7 |
| patatin-like phospholipase family protein | PHEP_RS02035 | Not Available | Negative | 480081 - 480851 | 27591.9 |
| gliding motility lipoprotein gldb | PHEP_RS02040 | Not Available | Negative | 480857 - 481885 | 40181.3 |
| porin family protein | PHEP_RS02045 | Not Available | Positive | 481929 - 482582 | 23977.7 |
| nad+ synthase | PHEP_RS02050 | Not Available | Positive | 482622 - 484262 | 61142.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
