Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS20370 | Not Available | Negative | 4926827 - 4927057 | 9018.54 |
| energy transducer tonb | PHEP_RS22460 | Not Available | Negative | 4927059 - 4927529 | 17035.4 |
| hypothetical protein | PHEP_RS22465 | Not Available | Negative | 4927579 - 4927881 | 10776.1 |
| exbd/tolr family protein | PHEP_RS20380 | Not Available | Negative | 4927913 - 4928452 | 19549.8 |
| exbd/tolr family protein | PHEP_RS20385 | Not Available | Negative | 4928462 - 4929079 | 22998.8 |
| mota/tolq/exbb proton channel family protein | PHEP_RS20390 | Not Available | Negative | 4929163 - 4930005 | 29819.6 |
| phosphoenolpyruvate carboxykinase (atp) | PHEP_RS20395 | Not Available | Negative | 4930277 - 4931878 | 58966.2 |
| translation initiation factor | PHEP_RS20400 | Not Available | Negative | 4932022 - 4932375 | 12864.7 |
| diacylglycerol/lipid kinase family protein | PHEP_RS20405 | Not Available | Negative | 4932365 - 4933255 | 32399.4 |
| methionine adenosyltransferase | PHEP_RS20410 | Not Available | Positive | 4933488 - 4934738 | 45961.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
