Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PHEP_RS20270 | Not Available | Negative | 4907875 - 4908579 | 26445.9 |
| hemolysin family protein | PHEP_RS20275 | Not Available | Negative | 4908590 - 4909906 | 49066.4 |
| inorganic diphosphatase | PHEP_RS20280 | Not Available | Negative | 4909907 - 4910458 | 20982.2 |
| deda family protein | PHEP_RS20285 | Not Available | Negative | 4910461 - 4911123 | 25433.4 |
| nadh-quinone oxidoreductase subunit n | PHEP_RS20290 | Not Available | Negative | 4911169 - 4912542 | 50363.0 |
| complex i subunit 4 family protein | PHEP_RS20295 | Not Available | Negative | 4912547 - 4914013 | 53549.3 |
| nadh-quinone oxidoreductase subunit l | PHEP_RS20300 | Not Available | Negative | 4914035 - 4915927 | 68819.8 |
| nadh-quinone oxidoreductase subunit nuok | PHEP_RS20305 | Not Available | Negative | 4915947 - 4916276 | 12077.1 |
| nadh-quinone oxidoreductase subunit j | PHEP_RS20310 | Not Available | Negative | 4916276 - 4916773 | 17932.1 |
| nuoi/complex i 23 kda subunit family protein | PHEP_RS20315 | Not Available | Negative | 4916803 - 4917300 | 18908.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
