Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS20225 | Not Available | Positive | 4899385 - 4900572 | 45321.0 |
| feob-associated cys-rich membrane protein | PHEP_RS21975 | Not Available | Positive | 4900623 - 4900784 | 5641.93 |
| crp/fnr family transcriptional regulator | PHEP_RS20230 | Not Available | Positive | 4900800 - 4901390 | 22846.9 |
| ycei family protein | PHEP_RS20235 | Not Available | Positive | 4901480 - 4902010 | 19121.3 |
| pirin family protein | PHEP_RS20240 | Not Available | Positive | 4902059 - 4902931 | 31625.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PHEP_RS20245 | Not Available | Negative | 4903082 - 4903561 | 17352.1 |
| type ix secretion system outer membrane channel protein porv | PHEP_RS20250 | Not Available | Negative | 4903620 - 4904798 | 42524.4 |
| sumf1/egtb/pvdo family nonheme iron enzyme | PHEP_RS20255 | Not Available | Positive | 4905014 - 4906612 | 59780.1 |
| biotin/lipoyl-containing protein | PHEP_RS20260 | Not Available | Negative | 4906681 - 4907178 | 18225.2 |
| duf4159 domain-containing protein | PHEP_RS20265 | Not Available | Negative | 4907222 - 4907878 | 24877.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
