Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PHEP_RS20175 | Not Available | Negative | 4888962 - 4889711 | 29386.5 |
| serine acetyltransferase | PHEP_RS20180 | Not Available | Negative | 4889740 - 4890261 | 19029.5 |
| glycosyltransferase family 4 protein | PHEP_RS20185 | Not Available | Positive | 4890369 - 4891637 | 47054.5 |
| glycosyltransferase family 2 protein | PHEP_RS20190 | Not Available | Positive | 4891634 - 4892392 | 28900.6 |
| 3-ketoacyl-acp reductase | PHEP_RS20195 | Not Available | Negative | 4892422 - 4893138 | 25326.8 |
| translational gtpase typa | PHEP_RS20200 | Not Available | Negative | 4893291 - 4895090 | 66796.0 |
| alpha/beta hydrolase | PHEP_RS20205 | Not Available | Negative | 4895472 - 4896287 | 30552.8 |
| atp-grasp domain-containing protein | PHEP_RS20210 | Not Available | Positive | 4896457 - 4897449 | 37651.0 |
| carboxylate-amine ligase | PHEP_RS20215 | Not Available | Positive | 4897446 - 4898549 | 42193.4 |
| type 1 glutamine amidotransferase | PHEP_RS20220 | Not Available | Positive | 4898553 - 4899383 | 31347.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
