Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2480 family protein | PHEP_RS20075 | Not Available | Negative | 4867573 - 4868088 | 19174.3 |
| peptidylprolyl isomerase | PHEP_RS20080 | Not Available | Negative | 4868160 - 4870256 | 75875.3 |
| hypothetical protein | PHEP_RS20085 | Not Available | Negative | 4870328 - 4870855 | 19290.8 |
| hypothetical protein | PHEP_RS20090 | Not Available | Negative | 4870944 - 4872257 | 48231.6 |
| type iii pantothenate kinase | PHEP_RS20095 | Not Available | Negative | 4872220 - 4872975 | 27520.2 |
| duf6427 family protein | PHEP_RS20100 | Not Available | Negative | 4873050 - 4874030 | 38411.6 |
| glycosyltransferase family protein | PHEP_RS20105 | Not Available | Negative | 4874053 - 4875039 | 37760.4 |
| udp-2,3-diacylglucosamine diphosphatase | PHEP_RS20110 | Not Available | Negative | 4875092 - 4875943 | 32911.8 |
| hypothetical protein | PHEP_RS20115 | Not Available | Negative | 4876169 - 4878646 | 91744.9 |
| hypothetical protein | PHEP_RS20120 | Not Available | Negative | 4878731 - 4878979 | 9501.77 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
