Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | PHEP_RS01955 | Not Available | Positive | 466061 - 467182 | 41572.7 |
| atp synthase f0 subunit c | PHEP_RS01960 | Not Available | Positive | 467225 - 467437 | 6627.45 |
| f0f1 atp synthase subunit b | PHEP_RS01965 | Not Available | Positive | 467525 - 468022 | 18617.8 |
| atp synthase f1 subunit delta | PHEP_RS01970 | Not Available | Positive | 468057 - 468605 | 19977.2 |
| f0f1 atp synthase subunit alpha | PHEP_RS01975 | Not Available | Positive | 468664 - 470238 | 56707.5 |
| atp synthase f1 subunit gamma | PHEP_RS01980 | Not Available | Positive | 470313 - 471194 | 32095.7 |
| hypothetical protein | PHEP_RS01985 | Not Available | Positive | 471355 - 471570 | 7773.81 |
| duf4349 domain-containing protein | PHEP_RS01990 | Not Available | Positive | 471712 - 472554 | 32138.5 |
| crossover junction endodeoxyribonuclease ruvc | PHEP_RS01995 | Not Available | Negative | 472566 - 473129 | 20756.6 |
| hypothetical protein | PHEP_RS02000 | Not Available | Positive | 473172 - 474149 | 37777.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
