Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PHEP_RS19875 | Not Available | Negative | 4808378 - 4809808 | 53304.6 |
| arac family transcriptional regulator | PHEP_RS19880 | Not Available | Positive | 4809986 - 4810855 | 33680.5 |
| tlpa family protein disulfide reductase | PHEP_RS19885 | Not Available | Negative | 4810871 - 4812181 | 49448.3 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS19890 | Not Available | Negative | 4812218 - 4813654 | 53279.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS19895 | Not Available | Negative | 4813702 - 4817031 | 122073.0 |
| fecr family protein | PHEP_RS19900 | Not Available | Negative | 4817155 - 4818258 | 40338.5 |
| rna polymerase sigma factor | PHEP_RS19905 | Not Available | Negative | 4818327 - 4818857 | 20477.7 |
| tlpa disulfide reductase family protein | PHEP_RS19910 | Not Available | Negative | 4819046 - 4820176 | 41910.9 |
| tlpa disulfide reductase family protein | PHEP_RS19915 | Not Available | Negative | 4820214 - 4821350 | 42026.8 |
| discoidin domain-containing protein | PHEP_RS19920 | Not Available | Negative | 4821384 - 4822355 | 35117.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
