Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PHEP_RS19825 | Not Available | Negative | 4791093 - 4791962 | 32362.3 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | PHEP_RS19830 | Not Available | Negative | 4791955 - 4794345 | 90500.0 |
| glycoside hydrolase family 28 protein | PHEP_RS19835 | Not Available | Negative | 4794373 - 4795980 | 58766.6 |
| glycoside hydrolase family 88/105 protein | PHEP_RS19840 | Not Available | Negative | 4796012 - 4797118 | 42084.2 |
| polysaccharide lyase family 8 super-sandwich domain-containing protein | PHEP_RS19845 | Not Available | Negative | 4797174 - 4799330 | 79739.9 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS19850 | Not Available | Negative | 4799346 - 4800998 | 60587.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS19855 | Not Available | Negative | 4801041 - 4803968 | 106912.0 |
| glycoside hydrolase | PHEP_RS19860 | Not Available | Negative | 4804284 - 4805900 | 61038.4 |
| age family epimerase/isomerase | PHEP_RS19865 | Not Available | Negative | 4805951 - 4807144 | 46455.6 |
| glycosidase | PHEP_RS19870 | Not Available | Negative | 4807141 - 4808328 | 44519.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
