Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS19775 | Not Available | Negative | 4771461 - 4773455 | 73060.2 |
| tonb-dependent receptor | PHEP_RS19780 | Not Available | Negative | 4773470 - 4776856 | 124429.0 |
| fecr family protein | PHEP_RS19785 | Not Available | Negative | 4777055 - 4778212 | 42707.8 |
| rna polymerase sigma factor | PHEP_RS19790 | Not Available | Negative | 4778334 - 4778924 | 23006.5 |
| rna polymerase sigma-70 factor | PHEP_RS19795 | Not Available | Negative | 4779402 - 4780016 | 23827.7 |
| hypothetical protein | PHEP_RS19800 | Not Available | Negative | 4780133 - 4781086 | 37233.7 |
| bama/tama family outer membrane protein | PHEP_RS19805 | Not Available | Negative | 4781294 - 4782532 | 46359.3 |
| polysaccharide lyase family 8 super-sandwich domain-containing protein | PHEP_RS19810 | Not Available | Negative | 4782667 - 4785456 | 101884.0 |
| glycosyl hydrolase | PHEP_RS19815 | Not Available | Negative | 4785473 - 4788739 | 122936.0 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | PHEP_RS19820 | Not Available | Negative | 4788895 - 4791096 | 82305.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
