Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS19725 | Not Available | Positive | 4757238 - 4757822 | 22743.6 |
| hypothetical protein | PHEP_RS19730 | Not Available | Positive | 4757809 - 4758192 | 14540.7 |
| hypothetical protein | PHEP_RS19735 | Not Available | Negative | 4758228 - 4758497 | 9898.77 |
| hypothetical protein | PHEP_RS19740 | Not Available | Positive | 4758712 - 4760934 | 83618.0 |
| gliding motility-associated c-terminal domain-containing protein | PHEP_RS21780 | Not Available | Negative | 4761010 - 4764210 | 112643.0 |
| carbon starvation protein a | PHEP_RS19750 | Not Available | Negative | 4764207 - 4766048 | 66756.9 |
| heparinase ii/iii family protein | PHEP_RS19755 | Not Available | Negative | 4766060 - 4768003 | 72190.3 |
| polysaccharide pyruvyl transferase family protein | PHEP_RS19760 | Not Available | Negative | 4768004 - 4769299 | 48819.4 |
| glycoside hydrolase family 88 protein | PHEP_RS19765 | Not Available | Negative | 4769321 - 4770484 | 44363.8 |
| duf5017 domain-containing protein | PHEP_RS19770 | Not Available | Negative | 4770510 - 4771400 | 32988.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
