Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS19675 | Not Available | Negative | 4745343 - 4745585 | 8734.69 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | PHEP_RS19680 | Not Available | Negative | 4745566 - 4746756 | 44860.5 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | PHEP_RS19685 | Not Available | Negative | 4746749 - 4747771 | 38035.6 |
| wzz/fepe/etk n-terminal domain-containing protein | PHEP_RS19690 | Not Available | Negative | 4747792 - 4748889 | 40748.7 |
| slbb domain-containing protein | PHEP_RS19695 | Not Available | Negative | 4748933 - 4751404 | 90472.6 |
| hypothetical protein | PHEP_RS19700 | Not Available | Negative | 4751613 - 4752320 | 26221.4 |
| helix-turn-helix domain-containing protein | PHEP_RS19705 | Not Available | Positive | 4752521 - 4752862 | 13034.0 |
| nucleotide sugar dehydrogenase | PHEP_RS19710 | Not Available | Positive | 4753061 - 4754347 | 47122.7 |
| hypothetical protein | PHEP_RS19715 | Not Available | Negative | 4754365 - 4756155 | 62511.9 |
| duf6266 family protein | PHEP_RS19720 | Not Available | Negative | 4756282 - 4756719 | 15507.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
