Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | PHEP_RS19625 | Not Available | Negative | 4736181 - 4736804 | 23142.8 |
| n-acetyl sugar amidotransferase | PHEP_RS19630 | Not Available | Negative | 4736801 - 4737931 | 42577.6 |
| gnat family n-acetyltransferase | PHEP_RS19635 | Not Available | Negative | 4737928 - 4738473 | 20594.8 |
| hypothetical protein | PHEP_RS19640 | Not Available | Negative | 4738473 - 4739435 | 35962.4 |
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS19645 | Not Available | Negative | 4739419 - 4740729 | 48163.9 |
| gfo/idh/moca family protein | PHEP_RS19650 | Not Available | Negative | 4740731 - 4741681 | 36412.5 |
| pseudaminic acid cytidylyltransferase | PHEP_RS19655 | Not Available | Negative | 4741674 - 4742387 | 26834.0 |
| pseudaminic acid synthase | PHEP_RS19660 | Not Available | Negative | 4742405 - 4743454 | 39010.9 |
| methionyl-trna formyltransferase | PHEP_RS21775 | Not Available | Negative | 4743441 - 4744325 | 33292.8 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | PHEP_RS19670 | Not Available | Negative | 4744322 - 4745350 | 38407.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
