Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose dehydrogenase family protein | PHEP_RS19575 | Not Available | Negative | 4724250 - 4725563 | 48273.1 |
| glycosyltransferase family 4 protein | PHEP_RS19580 | Not Available | Negative | 4725651 - 4726883 | 46815.8 |
| glycosyltransferase family 2 protein | PHEP_RS19585 | Not Available | Negative | 4726887 - 4727762 | 33978.9 |
| hypothetical protein | PHEP_RS19590 | Not Available | Negative | 4727762 - 4728973 | 46266.4 |
| nad-dependent epimerase/dehydratase family protein | PHEP_RS19595 | Not Available | Negative | 4729005 - 4729937 | 34908.0 |
| glycosyltransferase | PHEP_RS19600 | Not Available | Negative | 4729934 - 4731172 | 47557.6 |
| lipopolysaccharide biosynthesis protein | PHEP_RS19605 | Not Available | Negative | 4731169 - 4732713 | 59073.0 |
| hypothetical protein | PHEP_RS19610 | Not Available | Negative | 4732738 - 4734042 | 49909.1 |
| n-acetyl sugar amidotransferase | PHEP_RS19615 | Not Available | Negative | 4734063 - 4735316 | 49349.9 |
| imidazole glycerol phosphate synthase subunit hisf | PHEP_RS19620 | Not Available | Negative | 4735313 - 4736179 | 31600.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
