Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biliverdin-producing heme oxygenase | PHEP_RS19525 | Not Available | Positive | 4711465 - 4712022 | 20775.8 |
| gliding motility-associated c-terminal domain-containing protein | PHEP_RS19530 | Not Available | Negative | 4712051 - 4714945 | 106140.0 |
| dtdp-4-dehydrorhamnose reductase | PHEP_RS19535 | Not Available | Negative | 4714981 - 4715835 | 31658.1 |
| hypothetical protein | PHEP_RS19540 | Not Available | Negative | 4715854 - 4717470 | 61879.2 |
| polysaccharide biosynthesis protein | PHEP_RS19545 | Not Available | Negative | 4717467 - 4719425 | 73485.8 |
| sugar transferase | PHEP_RS19550 | Not Available | Negative | 4719650 - 4720249 | 22704.3 |
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS19555 | Not Available | Negative | 4720246 - 4721451 | 44408.6 |
| gnat family n-acetyltransferase | PHEP_RS19560 | Not Available | Negative | 4721452 - 4722030 | 21926.0 |
| glycosyltransferase | PHEP_RS19565 | Not Available | Negative | 4722020 - 4723192 | 44967.4 |
| udp-glucuronic acid decarboxylase family protein | PHEP_RS19570 | Not Available | Negative | 4723261 - 4724250 | 37114.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
