Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | PHEP_RS19475 | Not Available | Positive | 4698207 - 4699370 | 43695.0 |
| exosortase y-associated wzy-like protein | PHEP_RS19480 | Not Available | Positive | 4699363 - 4700766 | 53435.5 |
| xrty-associated glycosyltransferase xyag1 | PHEP_RS19485 | Not Available | Positive | 4700793 - 4701932 | 42962.6 |
| glycosyltransferase family 2 protein | PHEP_RS19490 | Not Available | Positive | 4701925 - 4702788 | 34518.5 |
| putative colanic acid biosynthesis acetyltransferase | PHEP_RS19495 | Not Available | Positive | 4702772 - 4703326 | 20224.6 |
| mray family glycosyltransferase | PHEP_RS19500 | Not Available | Positive | 4703337 - 4704440 | 40191.4 |
| pas domain-containing protein | PHEP_RS19505 | Not Available | Positive | 4704562 - 4705221 | 25450.4 |
| hypothetical protein | PHEP_RS19510 | Not Available | Negative | 4705259 - 4705582 | 12984.1 |
| chemotaxis protein cheb | PHEP_RS19515 | Not Available | Negative | 4705711 - 4709724 | 152915.0 |
| gaf domain-containing protein | PHEP_RS19520 | Not Available | Negative | 4709731 - 4711260 | 57986.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
