Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PHEP_RS22385 | Not Available | Positive | 4687113 - 4688369 | 45616.0 |
| class i sam-dependent dna methyltransferase | PHEP_RS19430 | Not Available | Positive | 4688373 - 4688900 | 20681.7 |
| glycosyltransferase | PHEP_RS19435 | Not Available | Positive | 4688906 - 4690402 | 57854.8 |
| glycosyltransferase family 2 protein | PHEP_RS19440 | Not Available | Positive | 4690399 - 4691295 | 34740.0 |
| glycosyltransferase | PHEP_RS19445 | Not Available | Positive | 4691292 - 4692422 | 43319.8 |
| acyltransferase family protein | PHEP_RS19450 | Not Available | Positive | 4692419 - 4693690 | 48364.7 |
| glycosyltransferase | PHEP_RS19455 | Not Available | Positive | 4693704 - 4694684 | 38081.1 |
| glycosyltransferase family 4 protein | PHEP_RS19460 | Not Available | Positive | 4694681 - 4695709 | 38098.5 |
| glycosyltransferase | PHEP_RS19465 | Not Available | Positive | 4695706 - 4696923 | 46214.1 |
| hypothetical protein | PHEP_RS19470 | Not Available | Positive | 4696984 - 4698210 | 47125.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
