Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | PHEP_RS01905 | Not Available | Positive | 452778 - 453548 | 29454.3 |
| gliding motility-associated lipoprotein | PHEP_RS01910 | Not Available | Positive | 453718 - 455085 | 51145.9 |
| gliding motility protein gldl | PHEP_RS01915 | Not Available | Positive | 455127 - 455936 | 28817.3 |
| gliding motility protein gldm | PHEP_RS01920 | Not Available | Positive | 455983 - 457524 | 54987.7 |
| gliding motility protein gldn | PHEP_RS01925 | Not Available | Positive | 457531 - 458418 | 33655.3 |
| excinuclease abc subunit uvrc | PHEP_RS01930 | Not Available | Negative | 458472 - 460268 | 69498.5 |
| penicillin-binding protein 1a | PHEP_RS01935 | Not Available | Negative | 460293 - 462515 | 83262.6 |
| tetratricopeptide repeat protein | PHEP_RS01940 | Not Available | Negative | 462517 - 465177 | 101176.0 |
| atpz/atpi family protein | PHEP_RS01945 | Not Available | Positive | 465385 - 465609 | 8314.25 |
| hypothetical protein | PHEP_RS01950 | Not Available | Positive | 465657 - 466043 | 14906.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
