Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | PHEP_RS19270 | Not Available | Negative | 4636577 - 4637779 | 44922.8 |
| glycoside hydrolase family 2 | PHEP_RS19275 | Not Available | Negative | 4637782 - 4640538 | 103111.0 |
| glycoside hydrolase family 88 protein | PHEP_RS19280 | Not Available | Negative | 4640605 - 4641867 | 47842.7 |
| duf5107 domain-containing protein | PHEP_RS19285 | Not Available | Negative | 4641874 - 4645224 | 128760.0 |
| sugar porter family mfs transporter | PHEP_RS19290 | Not Available | Negative | 4645267 - 4646619 | 48874.9 |
| arac family transcriptional regulator | PHEP_RS19295 | Not Available | Positive | 4646809 - 4647693 | 34783.9 |
| sgnh/gdsl hydrolase family protein | PHEP_RS19300 | Not Available | Negative | 4647703 - 4648422 | 26925.4 |
| glycoside hydrolase family 2 | PHEP_RS19305 | Not Available | Negative | 4648446 - 4651220 | 105434.0 |
| glycoside hydrolase | PHEP_RS19310 | Not Available | Negative | 4651245 - 4652861 | 59570.7 |
| hypothetical protein | PHEP_RS19315 | Not Available | Negative | 4652861 - 4654453 | 57135.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
