Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | PHEP_RS19170 | Not Available | Negative | 4614118 - 4614396 | 10506.5 |
| nad(p)h-dependent flavin oxidoreductase | PHEP_RS19175 | Not Available | Negative | 4614393 - 4615340 | 33587.3 |
| amidohydrolase family protein | PHEP_RS19180 | Not Available | Negative | 4615349 - 4616527 | 43678.5 |
| helix-turn-helix transcriptional regulator | PHEP_RS19185 | Not Available | Positive | 4616591 - 4617283 | 27019.8 |
| winged helix-turn-helix transcriptional regulator | PHEP_RS19190 | Not Available | Negative | 4617311 - 4617670 | 13575.7 |
| nad(p)h-binding protein | PHEP_RS19195 | Not Available | Positive | 4617752 - 4618636 | 31023.1 |
| sialate o-acetylesterase | PHEP_RS19200 | Not Available | Negative | 4618643 - 4619473 | 30751.5 |
| arac family transcriptional regulator | PHEP_RS19205 | Not Available | Negative | 4619532 - 4620359 | 32054.0 |
| mfs transporter | PHEP_RS19210 | Not Available | Positive | 4620453 - 4621970 | 54341.4 |
| arylsulfatase | PHEP_RS19215 | Not Available | Positive | 4622249 - 4623655 | 52764.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
