Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | PHEP_RS19120 | Not Available | Negative | 4603118 - 4605433 | 84824.3 |
| lytic transglycosylase domain-containing protein | PHEP_RS19125 | Not Available | Negative | 4605508 - 4606725 | 46213.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PHEP_RS19130 | Not Available | Negative | 4606803 - 4608266 | 52967.2 |
| sec-independent protein translocase subunit tata/tatb | PHEP_RS19135 | Not Available | Negative | 4608309 - 4608512 | 7187.93 |
| sec-independent protein translocase subunit tata/tatb | PHEP_RS22380 | Not Available | Negative | 4608519 - 4608941 | 15652.3 |
| murein hydrolase activator envc family protein | PHEP_RS19145 | Not Available | Negative | 4609052 - 4610341 | 47645.3 |
| duf4292 domain-containing protein | PHEP_RS19150 | Not Available | Negative | 4610364 - 4611155 | 29254.6 |
| tetratricopeptide repeat protein | PHEP_RS19155 | Not Available | Negative | 4611133 - 4612185 | 39616.6 |
| dutp diphosphatase | PHEP_RS19160 | Not Available | Negative | 4612191 - 4612622 | 15565.7 |
| lipopolysaccharide biosynthesis protein | PHEP_RS19165 | Not Available | Negative | 4612619 - 4614118 | 57776.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
