Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lutb/lldf family l-lactate oxidation iron-sulfur protein | PHEP_RS19070 | Not Available | Positive | 4587008 - 4588399 | 52622.7 |
| alpha-ketoacid dehydrogenase subunit alpha/beta | PHEP_RS19075 | Not Available | Positive | 4588403 - 4590382 | 73452.4 |
| hypothetical protein | PHEP_RS19080 | Not Available | Positive | 4590537 - 4591235 | 26328.2 |
| sprt-like domain-containing protein | PHEP_RS19085 | Not Available | Negative | 4591184 - 4591801 | 23666.8 |
| ferrous iron transport protein b | PHEP_RS19090 | Not Available | Negative | 4591818 - 4593920 | 77522.7 |
| feoa family protein | PHEP_RS19095 | Not Available | Negative | 4593933 - 4594148 | 7721.72 |
| vanz family protein | PHEP_RS19100 | Not Available | Negative | 4594445 - 4594852 | 15694.4 |
| glycine cleavage system protein gcvh | PHEP_RS19105 | Not Available | Negative | 4594856 - 4595236 | 13686.1 |
| cell surface protein spra | PHEP_RS19110 | Not Available | Negative | 4595337 - 4602521 | 270206.0 |
| holliday junction branch migration protein ruva | PHEP_RS19115 | Not Available | Negative | 4602531 - 4603115 | 21137.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
