Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PHEP_RS19025 | Not Available | Positive | 4578046 - 4579125 | 39030.0 |
| yced family protein | PHEP_RS19030 | Not Available | Positive | 4579186 - 4579719 | 20285.3 |
| 50s ribosomal protein l32 | PHEP_RS21960 | Not Available | Positive | 4579738 - 4579929 | 7122.52 |
| phosphate acyltransferase plsx | PHEP_RS19035 | Not Available | Positive | 4580028 - 4580966 | 33422.9 |
| beta-ketoacyl-acp synthase iii | PHEP_RS19040 | Not Available | Positive | 4580978 - 4581967 | 35904.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PHEP_RS19045 | Not Available | Positive | 4582040 - 4582513 | 16965.4 |
| acetyl-coa carboxylase biotin carboxylase subunit | PHEP_RS19050 | Not Available | Positive | 4582529 - 4583869 | 49575.2 |
| twin-arginine translocase subunit tatc | PHEP_RS19055 | Not Available | Positive | 4583951 - 4584844 | 33615.0 |
| ribose 5-phosphate isomerase b | PHEP_RS19060 | Not Available | Positive | 4584881 - 4585321 | 16005.0 |
| m28 family peptidase | PHEP_RS19065 | Not Available | Positive | 4585332 - 4586918 | 58360.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
