Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | PHEP_RS01855 | Not Available | Negative | 440359 - 441240 | 33513.6 |
| cupin-like domain-containing protein | PHEP_RS01860 | Not Available | Negative | 441325 - 442206 | 34524.4 |
| fasciclin domain-containing protein | PHEP_RS01865 | Not Available | Negative | 442382 - 442933 | 19288.9 |
| alpha-galactosidase | PHEP_RS01870 | Not Available | Negative | 443019 - 445121 | 79134.3 |
| duf1800 domain-containing protein | PHEP_RS01875 | Not Available | Positive | 445243 - 447237 | 74374.1 |
| duf1501 domain-containing protein | PHEP_RS01880 | Not Available | Positive | 447256 - 448524 | 45636.4 |
| formylglycine-generating enzyme family protein | PHEP_RS01885 | Not Available | Positive | 448564 - 449700 | 41688.0 |
| sdr family oxidoreductase | PHEP_RS01890 | Not Available | Negative | 449705 - 450493 | 29049.4 |
| radical sam family heme chaperone hemw | PHEP_RS01895 | Not Available | Negative | 450511 - 451650 | 42980.0 |
| duf4271 domain-containing protein | PHEP_RS01900 | Not Available | Positive | 451773 - 452759 | 37833.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
