Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | PHEP_RS18875 | Not Available | Positive | 4535656 - 4536405 | 27241.8 |
| glycosyl hydrolase family 28 protein | PHEP_RS18880 | Not Available | Positive | 4536497 - 4537816 | 48366.5 |
| peptide-methionine (s)-s-oxide reductase msra | PHEP_RS18885 | Not Available | Negative | 4537839 - 4538327 | 18470.6 |
| alpha-n-acetylglucosaminidase | PHEP_RS18890 | Not Available | Negative | 4538390 - 4540597 | 84683.8 |
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS18895 | Not Available | Negative | 4540599 - 4541408 | 30000.3 |
| duf5689 domain-containing protein | PHEP_RS18900 | Not Available | Negative | 4541486 - 4543063 | 55715.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS18905 | Not Available | Negative | 4543101 - 4544657 | 58220.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS18910 | Not Available | Negative | 4544665 - 4548174 | 128066.0 |
| fecr family protein | PHEP_RS18915 | Not Available | Negative | 4548405 - 4549583 | 43000.5 |
| rna polymerase sigma factor | PHEP_RS18920 | Not Available | Negative | 4549650 - 4550288 | 24604.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
