Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | PHEP_RS18825 | Not Available | Positive | 4524375 - 4525697 | 47797.0 |
| fibronectin type iii domain-containing protein | PHEP_RS18830 | Not Available | Positive | 4525747 - 4527144 | 50726.2 |
| fg-gap-like repeat-containing protein | PHEP_RS18835 | Not Available | Positive | 4527333 - 4529240 | 69516.1 |
| Trna-glu | Not Available | Not Available | Positive | 4529760 - 4529831 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4529875 - 4529950 | Not Available |
| gtpase era | PHEP_RS18850 | Not Available | Positive | 4530062 - 4530949 | 33672.7 |
| ribosome biogenesis gtpase der | PHEP_RS18855 | Not Available | Positive | 4531025 - 4532326 | 49058.4 |
| s41 family peptidase | PHEP_RS18860 | Not Available | Negative | 4532328 - 4533908 | 58864.6 |
| n-acetylmuramic acid 6-phosphate etherase | PHEP_RS18865 | Not Available | Positive | 4534221 - 4535027 | 28915.9 |
| hypothetical protein | PHEP_RS18870 | Not Available | Positive | 4535037 - 4535606 | 22969.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
